Debian Science Project
Summary
Bugs of package science-chemistry
Total bugs: 78
Open bugs: 53
Fixed bugs: 25
Links to other tasks
Tasks overview
Astronomy 72 (324)
Astronomy-dev 13 (46)
Biology 9 (78)
Chemistry 53 (460)
Data acquisition 41 (222)
Electronics 185 (1283)
Engineering 24 (330)
Engineering-dev 49 (443)
Geography 208 (1422)
Image analysis 14 (176)
Linguistics 10 (60)
Machine learning 58 (495)
Mathematics 118 (807)
Mathematics-dev 107 (719)
Meteorology 39 (273)
Meteorology-dev 123 (430)
Nanoscale physics 236 (1612)
Physics 65 (527)
Physics-dev 0 (0)
Psychophysics 9 (56)
Robotics 76 (606)
Simulations 8 (129)
Statistics 28 (188)
Typesetting 881 (4106)
Viewing 279 (1166)
Legend
SeverityDependentSuggested
critical 0 0
grave 0 0
serious 3 0
important 14 0
normal 15 0
minor 8 1
wishlist 12 0

Summary bugs page of Chemistry meta package

Immediately looking into bugs of the dependencies of this metapackage is advised (460)*

Open bugs in dependent packages

3 serious, 14 important, 15 normal, 8 minor, 12 wishlist
adun.app (1) Homepage: http://diana.imim.es/Adun Vcs Debian Med Packaging Team
671226 adun.app: Please consider splitting up into GUI and non-GUI packages
avogadro (2) Homepage: http://avogadro.sourceforge.net/ Vcs Debichem Team
643921 avogadro: Includes non-free data files upstream
700085 avogadro aborts with segmentation fault
cdk (3) Homepage: http://cdk.sourceforge.net/ Vcs Debian Java Maintainers
505226 Please package jchempaint
627523 libcdk-java should depend on libstdc++5, so that the InChI part works
635182 libcdk-java: new upstream release 1.4.1
chemical-mime-data (2) Homepage: http://chemical-mime.sourceforge.net Vcs Debichem Team
420795 chemical-mime-data: Unknown media type in type 'chemical/x-*' fixed-upstream, wontfix
684017 chemical-mime-data: unowned files after purge: /usr/share/mime/chemical/x-*.xml
chemical-structures (2) Homepage: Not maintained in Vcs Georges Khaznadar
669749 chemical-structures: transition towards Apache 2.4
695079 chemical-structures: [INTL:ja] Japanease translation of the debconf templates l10n, patch
cp2k (1) Homepage: http://www.cp2k.org Vcs Debichem Team
701263 cp2k: ftbfs with GCC-4.8 sid
freefoam (4) Homepage: http://freefoam.wiki.sourceforge.net/ Vcs Debian Science Maintainers
685112 freefoam: FTBFS - build output directories not created
685114 freefoam: please build docs only as needed
687465 libfreefoam1: fails to upgrade from 'testing' - trying to overwrite /usr/lib/freefoam/libedgeMesh.so.0.1.0
693394 freefoam-dev-doc package increased from 66MB to 622MB!
gabedit (1) Homepage: http://gabedit.sourceforge.net Vcs Debichem Team
703965 gabedit aborts while reading output: buffer overflow detected upstream
galculator (2) Homepage: http://galculator.sourceforge.net/ Vcs Dmitry Smirnov
210696 galculator: If more than one +-*/ key is pressed after a number the last selected should override the previous upstream
671129 galculator: More difficulties entering shift operations upstream
garlic (1) Homepage: http://www.zucic.org/garlic/ Vcs Debichem Team
669296 garlic: debcheckout fails pending
gdpc (1) Homepage: http://www.frantz.fi/software/gdpc.php Vcs Debian Med Packaging Team
640008 there is no icon for gdpc 2.2.5-1 from sid in GNOME->applications->science
gelemental (1) Homepage: http://web.archive.org/web/20080209213045/http://www.kdau.com/projects/gelemental/ Vcs Debichem Team
687993 gelemental: wrong name for francium discoverer
ghemical (3) Homepage: http://bioinformatics.org/ghemical/ghemical/ Vcs Debichem Team
567600 ghemical should depend on xfonts-75dpi
639321 ghemical: Patch fixes 3 typos patch
687028 ghemical: Help -> Contents fails to open pending
gnome-chemistry-utils (2) Homepage: http://www.nongnu.org/gchemutils/ Vcs Debichem Team
698149 gnome-chemistry-utils: Please upgrade to 0.14.0 patch
701290 gnome-chemistry-utils: ftbfs with GCC-4.8 sid
gperiodic (1) Homepage: http://www.frantz.fi/software/gperiodic.php Vcs Debichem Team
214493 gperiodic: Would be nice if GUI were spiffed-up patch
gromacs (1) Homepage: http://www.gromacs.org/ Vcs Debichem Team
644397 gromacs: pdb2gmx, version 4.5.5, fails with 'Illegal instruction' on i686, 3.0.0.1-686-pae (testing) moreinfo, unreproducible
jmol (1) Homepage: http://jmol.sourceforge.net/ Vcs Debichem Team
698394 Jmol binary does not depend on a Java runtime (patch included) patch
massxpert (1) Homepage: http://www.massxpert.org Vcs The Debichem Group
701319 massxpert: ftbfs with GCC-4.8 sid
mmass (1) Homepage: http://www.mmass.org/ Vcs The Debichem Group
675840 Fixed watch file patch
mopac7 (1) Homepage: http://sourceforge.net/projects/mopac7 Vcs Debichem Team
580828 libmopac7-1gf: Segmentation fault in lm7_ini_full_xyz()
mpqc (1) Homepage: http://www.mpqc.org Vcs Debichem Team
193616 mpqc has many missing libs in the linkages upstream
openbabel (1) Homepage: http://openbabel.sourceforge.net Vcs Debichem Team
588248 Provide library for static linkage (libopenbabel.a)
pdb2pqr (1) Homepage: http://pdb2pqr.poissonboltzmann.org/pdb2pqr/ Vcs Debian Med
674976 pdb2pqr: FTBFS on Debian GNU/Hurd [Patch attached] confirmed, patch, pending
psicode (2) Homepage: http://www.psicode.org/ Vcs Debichem Team
613088 manual page has a fixed size confirmed, upstream, wontfix
641474 psi3 fails using basis sets cc-pVNZ with N > 5 confirmed, moreinfo, wontfix
pymol (6) Homepage: http://www.pymol.org Vcs Debichem Team
506202 Please split up package into pymol and pymol-data
602610 Package freemol.mengine for full modeling capabilities
651609 pymol: Setting-Error: type read mismatch (int) 667
668586 pymol: Segfaults when opening saved session or show upstream
689445 pymol fail to load its own session (pse files) upstream
703782 pymol: Unable to launch the Menu
qutemol (4) Homepage: http://qutemol.sourceforge.net/ Vcs Debichem Team
642084 qutemol: Cannot start the program
648122 qutemol: FTBFS with libpng 1.5 patch
662487 qutemol: Please Build-Depends on libpng-dev, change from libpng12-dev
667759 [PATCH] qutemol: Helping to update to packaging format 3.0 patch
rasmol (1) Homepage: http://rasmol.org Vcs Debian Science Maintainers
665605 rasmol: Including individual glib headers no longer supported patch
viewmol (4) Homepage: Not maintained in Vcs Debian Science Maintainers
446750 reading vmol files: coord factor ignored and misdefined
446753 pdb import is broken
486612 viewmol: non-ASCII character in python script
623665 viewmol: is the libxp-dev build-dependency necessary?

Open bugs in suggested packages

1 minor
gdpc (1) Homepage: http://www.frantz.fi/software/gdpc.php Vcs Debian Med Packaging Team
640008 there is no icon for gdpc 2.2.5-1 from sid in GNOME->applications->science

Done bugs

bkchem (2) Homepage: http://bkchem.zirael.org Vcs Debichem Team
512826 bkchem: crash of X window after repeated use of object conf help, moreinfo
524921 bkchem crashes by using properties of arrow / crap SVG files because using local path for fonts help, moreinfo
chemtool (1) Homepage: http://ruby.chemie.uni-freiburg.de/~martin/chemtool/ Vcs Debichem Team
650112 Fails to start with a segmentation fault
freefoam (11) Homepage: http://freefoam.wiki.sourceforge.net/ Vcs Debian Science Maintainers
682927 freefoam: FTBFS with GCC-4.7 because of missing qualifications of template-dependent names patch, upstream
682928 freefoam: Contains non-DFSG-free files
682931 freefoam: The freefoam-log utility fails on truncated logs patch, upstream
682932 freefoam: The freefoam-log utility writes to $PWD/logs/ instead of <case>/logs/ patch, upstream
682934 freefoam: The -doc and -srcDoc options fail to find the Doxygen docs patch, upstream
682940 freefoam: FTBFS because of a missing build-dependency on graphviz
682942 freefoam: debian/copyright does not cover all files
682943 freefoam: The libfreefoam package installs *.so links which should be in libfreefoam-dev
682953 freefoam: The libfreefoam package does not have the SOVERSION in its name
683176 freefoam: The /usr/share/freefoam/data/foamLog.db is in the wrong place and package upstream
683369 freefoam-dev-doc: The API documentation is unusable
galculator (8) Homepage: http://galculator.sourceforge.net/ Vcs Dmitry Smirnov
519034 [galculator] Some Numpad keys do not work in the "Paper Mode"
671123 galculator: Some expressions are not accepted in Formula Entry input mode upstream
671125 galculator: Difficulties entering shift operations upstream
671127 galculator: Inconsistent behaviour of left and right shifts upstream
671128 galculator: Binary mode isn't really binary upstream
674842 can't enter decimal separator
694148 galculator: permanent error with co-maintainer's e-mail address
697732 galculator: Errors in ~/.xsession-errors
mpqc (1) Homepage: http://www.mpqc.org Vcs Debichem Team
661674 libsc-dev: sc-config --libs includes too many things
psicode (1) Homepage: http://www.psicode.org/ Vcs Debichem Team
641470 psi3: segfault in testsuite patch
viewmol (1) Homepage: Not maintained in Vcs Debian Science Maintainers
675831 Watch file patch
*To estimate the overall status of the packages in the dependencies of a metapackage a weighted severity is calculated. Done bugs are ignored and bugs in dependent and recommended packages are weighted by factor three compared to suggested packages. Release critical bugs have a much larger weight than important, while the contribution of normal bugs is even smaller and minor bugs have a very small weight. Wishlist bugs are ignored in this calculation. The resulting sum is compared to some boundaries to find a verbal form. The actual numbers need some adjustment to make real sense - this evaluation method is in testing phase.
The severities of bugs are weighted as follows:
critical10
grave10
serious10
important5
normal3
minor1
wishlist0
Last update: Wed, 17 Apr 2013 18:25:37 -0000